Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
CESC rs1005805 chr10:135092100 A/G 4.12E-10 298 7.47 20.23 21.4 KM Plot
CESC rs1005806 chr10:135091981 A/G 4.12E-10 298 7.47 20.23 21.4 KM Plot
CESC rs10114623 chr9:115631360 G/A 3.32E-5 298 4.22 21.18 22.45 KM Plot
CESC rs10130766 chr14:55977524 C/G 2.39E-5 299 18.98 24.3 20.43 KM Plot
CESC rs10513564 chr3:161059762 A/G 6.72E-5 299 25.03 21.13 19.05 KM Plot
CESC rs10515246 chr5:96099265 A/G 9.53E-6 296 21.17 25.33 5.1 KM Plot
CESC rs10515249 chr5:96125259 G/A 1.4E-6 299 21.33 24.08 6.73 KM Plot
CESC rs1054776 chr10:135055349 A/G 1.89E-14 295 21.73 17.07 3.33 KM Plot
CESC rs10678109 chr10:88226448 A/AGCC 1.6E-14 297 3.33 24.6 21.17 KM Plot
CESC rs10695575 chr10:88196173 G/GAAC 1.18E-14 298 3.33 24.9 21.17 KM Plot
CESC rs10736338 chr10:88239439 T/C 1.6E-14 297 3.33 24.6 21.17 KM Plot
CESC rs10739377 chr9:115631598 A/G 3.32E-5 299 21.97 21.18 4.22 KM Plot
CESC rs1077497 chr10:126723133 C/T 9.44E-5 299 16.38 25.77 21.23 KM Plot
CESC rs10788504 chr10:88161872 A/G 2.83E-14 293 3.33 24.3 21.13 KM Plot
CESC rs10788508 chr10:88214872 T/C 1.31E-14 296 3.33 24.9 21.17 KM Plot